myExperiment Papers

This page lists the papers published by the myExperiment team. If you're using myExperiment in your research we would be very pleased if you could mention myExperiment and cite our papers as appropriate. We'd also like to hear from you and keep a list on the Wiki of your projects and your papers that have used myExperiment (so that we can cite you).

The key myExperiment paper for citation purposes is:

These are the two most recently authored papers on myExperiment - the first is submitted, the second is published:

This paper discusses the design principles of Taverna and myExperiment

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Short Articles available on Wiki

Full List

Newman, D., Bechhofer, S. and De Roure, D. (2009) myExperiment: An ontology for e-Research. In: Workshop on Semantic Web Applications in Scientific Discourse in conjunction with the International Semantic Web Conference, October 2009, Washington DC, US. (Submitted) http://eprints.ecs.soton.ac.uk/17787/

De Roure, D. (2009) e-Science and the Web. IEEE Computer. (submitted, tenative publication date March 2010) http://eprints.ecs.soton.ac.uk/17765/

Goble, C. and De Roure, D. (2009) The impact of workflow tools on data-centric research. In: Data Intensive Computing: The Fourth Paradigm of Scientific Discovery. (In Press) http://eprints.ecs.soton.ac.uk/17336/

De Roure, D. and Goble, C. (2009) Lessons from myExperiment: Research Objects for Data Intensive Research. In: eScience Workshop 2009, October 15-17, 2009, Pittsburgh, US. (Submitted) http://eprints.ecs.soton.ac.uk/17744/

Pickering, A., Gutteridge, C. and De Roure, D. (2009) A networked registration scheme to support open science. In: UK e-Science All Hands Meeting 2009, Oxford, UK. (Submitted) http://eprints.ecs.soton.ac.uk/17680/

De Roure, D. and Goble, C. (2009) Lessons from myExperiment: Two insights into emerging e-Research practice. UK e-Science All Hands Meeting 2009, Oxford, UK. (Submitted) http://eprints.ecs.soton.ac.uk/17662/

De Roure, D. and Goble, C. (2009) myExperiment: A Web 2.0 Virtual Research Environment for Research using Computation and Services. In: Workshop On Integrating Digital Library Content with Computational Tools and Services at JCDL 2009, 19-06-2009, Austin, Texas, USA. http://eprints.ecs.soton.ac.uk/17607/

De Roure, D., Goble, C., Aleksejevs, S., Bechhofer, S., Bhagat, J., Cruickshank, D., Michaelides, D. and Newman, D. (2009) The myExperiment Open Repository for Scientific Workflows. In: Open Repositories 2009, May 2009, Atlanta, Georgia, US. http://eprints.ecs.soton.ac.uk/17131/

Goderis, A., Fisher, P., Gibson, A., Tanoh, F., Wolstencroft, K., De Roure, D. and Goble, C. (2009) Benchmarking Workflow Discovery: A Case Study From Bioinformatics. Concurrency: Practice and Experience . ISSN 1040-3108 (In Press) http://eprints.ecs.soton.ac.uk/17107/

De Roure, D. and Goble, C. (2009) Software Design for Empowering Scientists. IEEE Software, 26 (1). pp. 88-95. ISSN 0740-7459 http://eprints.ecs.soton.ac.uk/15032/

Goble, C., Missier, P. and De Roure, D. (2008) Scientific workflows. In: McGraw Hill 2009 Yearbook of Science & Technology, McGraw Hill. ISBN 00716056220071605622 http://eprints.ecs.soton.ac.uk/16628/

De Roure, D., Goble, C., Bhagat, J., Cruickshank, D., Goderis, A., Michaelides, D. and Newman, D. (2008) myExperiment: Defining the Social Virtual Research Environment. In: 4th IEEE International Conference on e-Science, 7-12 December 2008, Indianapolis, Indiana, USA. http://eprints.ecs.soton.ac.uk/16560/

Goble, C. and De Roure, D. (2008) Curating Scientific Web Services and Workflows. Educause Review, 43 (5). ISSN 1527-6619 http://eprints.ecs.soton.ac.uk/16561/

De Roure, D. and Goble, C. (2008) Re-evaluating the Grid: the social life of programs. In: CoreGRID series, pp. 201-212, Springer-Verlag New York Inc.. ISBN 978-0-387-78447-2 http://eprints.ecs.soton.ac.uk/15663/

Lin, Y., Poschen, M., Procter, R., Voss, A., Goble, C., Bhagat, J., De Roure, D., Cruickshank, D. and Rouncefield, M. (2008) Agile Management: Strategies for Developing a Social Networking Site for Scientists. In: 4th International Conference on e-Social Science, 18-20 June 2008, Manchester, uk.d http://eprints.ecs.soton.ac.uk/15854/

De Roure, D., Goble, C. and Stevens, R. (2009) The Design and Realisation of the myExperiment Virtual Research Environment for Social Sharing of Workflows. Future Generation Computer Systems 25, pp. 561-567. http://eprints.ecs.soton.ac.uk/15709/

Goderis, A., De Roure, D., Goble, C., Bhagat, J., Cruickshank, D., Fisher, P., Michaelides, D. and Tanoh, F. (2008) Discovering Scientific Workflows: The myExperiment Benchmarks. Technical Report, School of Electronics and Computer Science, University of Southampton. (Unpublished) http://eprints.ecs.soton.ac.uk/15662/

Goble, C. and De Roure, D. (2007) myExperiment: social networking for workflow-using e-scientists. In: Proceedings of the 2nd workshop on Workflows in support of large-scale science, 25 June 2007, Monterey, California, USA. http://eprints.ecs.soton.ac.uk/15095/

De Roure, D. and Goble, C. (2007) myExperiment - A Web 2.0 Virtual Research Environment. In: International Workshop on Virtual Research Environments and Collaborative Work Environments, May 2007, Edinburgh, UK. http://eprints.ecs.soton.ac.uk/13961/

De Roure, D., Goble, C. and Stevens, R. (2007) Designing the myExperiment Virtual Research Environment for the Social Sharing of Workflows. In: e-Science 2007: Proceedings of the Third IEEE International Conference on e-Science and Grid Computing, December 2007, Bangalore, India. http://eprints.ecs.soton.ac.uk/15838/

Missier, P., Turi, D., Goble, C., Oinn, T. and De Roure, D. (2007) Taverna Workflows: Syntax and Semantics. In: IEEE International Conference on e-Science and Grid Computing, December 2007, Bangalore, India. http://eprints.ecs.soton.ac.uk/14700/